Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LSMEM1Q8N8F7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 AC008741.2-201ENST00000612792 3115 ntBASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 AC013467.2-201ENST00000605472 835 ntBASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 DOC2GP-204ENST00000639052 2548 ntBASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LSMEM1Q8N8F7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 HLA-A-202ENST00000376806 1854 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AKR1C7P-201ENST00000305623 895 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 HLA-J-202ENST00000469281 1241 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AF228730.7-201ENST00000641842 219 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AL139011.1-202ENST00000642063 584 ntBASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LSMEM1Q8N8F7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms