Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 KRT18P32-201ENST00000424695 1287 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 AL009183.1-201ENST00000603760 355 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 AKAP8P1-201ENST00000434743 1349 ntBASIC17.15■□□□□ 0.34
CHPFQ8IZ52 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHPFQ8IZ52 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.14■□□□□ 0.34
CHPFQ8IZ52 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHPFQ8IZ52 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHPFQ8IZ52 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHPFQ8IZ52 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AC093525.9-201ENST00000624961 1746 ntBASIC17.14■□□□□ 0.33
CHPFQ8IZ52 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AC243562.1-201ENST00000560672 389 ntBASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.14■□□□□ 0.33
CHPFQ8IZ52 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 HCG4-201ENST00000418983 998 ntBASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 IGHV3-62-201ENST00000520057 340 ntBASIC17.13■□□□□ 0.33
CHPFQ8IZ52 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHPFQ8IZ52 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms