Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 RARRES2P9-201ENST00000565168 469 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 AC018529.1-201ENST00000613063 361 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 AC100757.3-201ENST00000622361 1406 ntBASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS3Q8IXF0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AC027369.6-201ENST00000525520 931 ntBASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 MIR4492-201ENST00000581627 80 ntBASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AL021920.2-201ENST00000624828 1351 ntBASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS3Q8IXF0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 TSSK5P-201ENST00000423978 907 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AP005018.1-201ENST00000525475 301 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AC073389.1-201ENST00000595595 795 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SPDYE12P-201ENST00000618416 771 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AP3S2-216ENST00000617003 1561 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AC116353.5-201ENST00000638148 1699 ntBASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS3Q8IXF0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPAS3Q8IXF0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms