Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 TSPY26P-202ENST00000565928 3884 ntBASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM42Q8IWZ5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM42Q8IWZ5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM42Q8IWZ5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 ME2P1-201ENST00000426028 1970 ntBASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 AC009336.1-201ENST00000608941 1553 ntBASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM42Q8IWZ5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 KRT8P10-201ENST00000450021 1447 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 HYMAI-201ENST00000635591 3347 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ALOX12P2-203ENST00000570921 1945 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 FAM220CP-201ENST00000395253 831 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 HOMER2P1-201ENST00000455653 964 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 AC087388.1-201ENST00000571370 1112 ntBASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM42Q8IWZ5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms