Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM48Q8IWZ4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 CROCCP2-202ENST00000412962 2773 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 LINC00896-202ENST00000609602 2128 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 RPSAP43-201ENST00000402237 625 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MCCD1P2-201ENST00000423228 335 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 PDPK2P-202ENST00000562415 1191 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 FER1L4-210ENST00000615531 5998 ntBASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM48Q8IWZ4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 AC116353.5-201ENST00000638148 1699 ntBASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 AC112482.1-201ENST00000492080 688 ntBASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 AL691403.2-201ENST00000618460 490 ntBASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM48Q8IWZ4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 AC074386.1-202ENST00000463561 864 ntBASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM48Q8IWZ4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms