Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 AC099522.2-201ENST00000607001 744 ntBASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 AL355306.1-201ENST00000415580 579 ntBASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN4BQ8IWT1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 KRT18P28-201ENST00000453838 1332 ntBASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 METTL21AP1-201ENST00000438852 635 ntBASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 AL009183.1-201ENST00000603760 355 ntBASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 AC105339.1-204ENST00000636249 355 ntBASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN4BQ8IWT1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TUBB8P12-201ENST00000308911 1335 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TUBB7P-202ENST00000428444 1305 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TUBB8P7-204ENST00000567960 1332 ntBASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN4BQ8IWT1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms