Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ALOX12P2-203ENST00000570921 1945 ntBASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 AC139749.1-202ENST00000617529 3139 ntBASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CROCCP3Q8IVE0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 AF186192.3-201ENST00000583427 947 ntBASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 IKBKGP1-201ENST00000612193 1073 ntBASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 AC005252.3-201ENST00000623855 2258 ntBASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CROCCP3Q8IVE0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 LINC00528-201ENST00000600723 2160 ntBASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 CR769767.2-201ENST00000622735 460 ntBASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 ME2P1-201ENST00000426028 1970 ntBASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AC004817.3-201ENST00000602957 2129 ntBASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.32■□□□□ 0.04
CROCCP3Q8IVE0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms