Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 TMEM261P1-201ENST00000604899 340 ntBASIC17.7■□□□□ 0.42
ALYREFQ86V81 AL390754.1-201ENST00000619088 582 ntBASIC17.7■□□□□ 0.42
ALYREFQ86V81 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 TUBB3P1-201ENST00000405796 1332 ntBASIC17.7■□□□□ 0.42
ALYREFQ86V81 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ALYREFQ86V81 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ALYREFQ86V81 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 MIR1909-201ENST00000411312 80 ntBASIC17.69■□□□□ 0.42
ALYREFQ86V81 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 AC004790.2-201ENST00000623588 572 ntBASIC17.69■□□□□ 0.42
ALYREFQ86V81 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ALYREFQ86V81 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ALYREFQ86V81 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.68■□□□□ 0.42
ALYREFQ86V81 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC009093.7-201ENST00000623853 1223 ntBASIC17.68■□□□□ 0.42
ALYREFQ86V81 AL138688.1-201ENST00000624851 1594 ntBASIC17.68■□□□□ 0.42
ALYREFQ86V81 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 AC034236.2-201ENST00000606662 1610 ntBASIC17.68■□□□□ 0.42
ALYREFQ86V81 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ALYREFQ86V81 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.68■□□□□ 0.42
ALYREFQ86V81 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALYREFQ86V81 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.67■□□□□ 0.42
ALYREFQ86V81 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALYREFQ86V81 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALYREFQ86V81 FO538757.1-201ENST00000623083 1397 ntBASIC17.67■□□□□ 0.42
ALYREFQ86V81 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms