Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC090616.6-201ENST00000582640 721 ntBASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 AL021920.2-201ENST00000624828 1351 ntBASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM1Q86UE6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AL645929.1-201ENST00000420084 975 ntBASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 ACTG1P4-201ENST00000425123 1122 ntBASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AC012306.2-201ENST00000609350 630 ntBASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 IGHV3-41-201ENST00000613121 348 ntBASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AC006011.2-201ENST00000621313 1158 ntBASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM1Q86UE6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AL596087.1-201ENST00000400979 1969 ntBASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AP002414.1-201ENST00000391405 1147 ntBASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AC246785.2-201ENST00000432512 513 ntBASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AC091607.1-201ENST00000490318 1060 ntBASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.67□□□□□ -0.06
LRRTM1Q86UE6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms