Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LDB1Q86U70 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LDB1Q86U70 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.85■□□□□ 0.29
LDB1Q86U70 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB1Q86U70 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.85■□□□□ 0.29
LDB1Q86U70 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 AC136632.2-201ENST00000512891 861 ntBASIC16.85■□□□□ 0.29
LDB1Q86U70 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB1Q86U70 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB1Q86U70 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 FAM215A-202ENST00000632077 792 ntBASIC16.85■□□□□ 0.29
LDB1Q86U70 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB1Q86U70 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.85■□□□□ 0.29
LDB1Q86U70 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.85■□□□□ 0.29
LDB1Q86U70 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LDB1Q86U70 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.84■□□□□ 0.29
LDB1Q86U70 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB1Q86U70 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.84■□□□□ 0.29
LDB1Q86U70 AC105339.3-201ENST00000560043 636 ntBASIC16.84■□□□□ 0.29
LDB1Q86U70 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 AL356488.2-201ENST00000602755 427 ntBASIC16.84■□□□□ 0.29
LDB1Q86U70 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LDB1Q86U70 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
LDB1Q86U70 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LDB1Q86U70 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LDB1Q86U70 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LDB1Q86U70 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LDB1Q86U70 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LDB1Q86U70 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.83■□□□□ 0.28
LDB1Q86U70 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.83■□□□□ 0.28
LDB1Q86U70 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LDB1Q86U70 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms