Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 FAM220CP-201ENST00000395253 831 ntBASIC17.19■□□□□ 0.34
CROCCP2Q86T23 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 AC141257.4-201ENST00000634557 245 ntBASIC17.19■□□□□ 0.34
CROCCP2Q86T23 AC136944.6-201ENST00000634818 245 ntBASIC17.19■□□□□ 0.34
CROCCP2Q86T23 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 AC006058.4-201ENST00000624016 1670 ntBASIC17.19■□□□□ 0.34
CROCCP2Q86T23 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CROCCP2Q86T23 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 Z99916.2-201ENST00000604037 246 ntBASIC17.18■□□□□ 0.34
CROCCP2Q86T23 AC013467.2-201ENST00000605472 835 ntBASIC17.18■□□□□ 0.34
CROCCP2Q86T23 AC073912.3-201ENST00000624414 853 ntBASIC17.18■□□□□ 0.34
CROCCP2Q86T23 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 FLJ16779-201ENST00000612722 7638 ntBASIC17.18■□□□□ 0.34
CROCCP2Q86T23 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CROCCP2Q86T23 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 MIR662-201ENST00000384847 95 ntBASIC17.17■□□□□ 0.34
CROCCP2Q86T23 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 AL031432.5-201ENST00000641059 760 ntBASIC17.17■□□□□ 0.34
CROCCP2Q86T23 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CROCCP2Q86T23 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CROCCP2Q86T23 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms