Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 AL662844.4-201ENST00000606367 2838 ntBASIC20.03■□□□□ 0.8
CREB3L3Q68CJ9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 AC009947.1-201ENST00000444350 727 ntBASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 AC005412.3-201ENST00000580309 715 ntBASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 AL121894.2-201ENST00000602977 491 ntBASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 ACTL9-202ENST00000612068 1252 ntBASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CREB3L3Q68CJ9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.02■□□□□ 0.79
CREB3L3Q68CJ9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.02■□□□□ 0.79
CREB3L3Q68CJ9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 RNA5SP415-201ENST00000517246 115 ntBASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 AC010654.1-201ENST00000615722 808 ntBASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 KRT8P39-201ENST00000396270 1433 ntBASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CREB3L3Q68CJ9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 PRSS29P-201ENST00000440800 595 ntBASIC20■□□□□ 0.79
CREB3L3Q68CJ9 FAM185BP-201ENST00000443595 716 ntBASIC20■□□□□ 0.79
CREB3L3Q68CJ9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 SIGLEC29P-201ENST00000599873 1114 ntBASIC20■□□□□ 0.79
CREB3L3Q68CJ9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CREB3L3Q68CJ9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms