Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AC073439.1-201ENST00000624121 1774 ntBASIC16.16■□□□□ 0.18
RIF1Q5UIP0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AL662890.1-201ENST00000396818 632 ntBASIC16.16■□□□□ 0.18
RIF1Q5UIP0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 FTLP1-201ENST00000449155 526 ntBASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AKR7A2P1-201ENST00000460134 915 ntBASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.16■□□□□ 0.18
RIF1Q5UIP0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 RPL17P11-201ENST00000417593 544 ntBASIC16.15■□□□□ 0.18
RIF1Q5UIP0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.15■□□□□ 0.18
RIF1Q5UIP0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
RIF1Q5UIP0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.14■□□□□ 0.18
RIF1Q5UIP0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 CROCCP3-202ENST00000420820 1947 ntBASIC16.14■□□□□ 0.17
RIF1Q5UIP0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RIF1Q5UIP0 UPF3AP2-201ENST00000457924 1132 ntBASIC16.14■□□□□ 0.17
RIF1Q5UIP0 CHMP4BP1-201ENST00000556017 588 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms