Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM71Q2Q1W2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 FAM220BP-201ENST00000377689 816 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 CR383656.12-201ENST00000549567 513 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 BANF1P1-201ENST00000553684 263 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 AL596325.1-201ENST00000563991 1082 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRIM71Q2Q1W2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 AC124947.2-201ENST00000547118 1133 ntBASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM71Q2Q1W2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 LINC02012-201ENST00000608206 1725 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 AC073439.1-201ENST00000624121 1774 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 NME2P1-201ENST00000426182 414 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 HLA-J-202ENST00000469281 1241 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 MEIS3P1-201ENST00000495167 958 ntBASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM71Q2Q1W2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms