Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DSC1Q08554 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.78■□□□□ 0.44
DSC1Q08554 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.78■□□□□ 0.44
DSC1Q08554 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
DSC1Q08554 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 HLA-H-201ENST00000383620 1096 ntBASIC17.78■□□□□ 0.44
DSC1Q08554 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.78■□□□□ 0.44
DSC1Q08554 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.78■□□□□ 0.44
DSC1Q08554 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.78■□□□□ 0.44
DSC1Q08554 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.78■□□□□ 0.44
DSC1Q08554 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.78■□□□□ 0.44
DSC1Q08554 RN7SL204P-201ENST00000582831 262 ntBASIC17.78■□□□□ 0.44
DSC1Q08554 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.78■□□□□ 0.44
DSC1Q08554 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.78■□□□□ 0.44
DSC1Q08554 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.78■□□□□ 0.44
DSC1Q08554 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DSC1Q08554 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.77■□□□□ 0.44
DSC1Q08554 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.77■□□□□ 0.44
DSC1Q08554 FAM220BP-201ENST00000377689 816 ntBASIC17.77■□□□□ 0.44
DSC1Q08554 AC236430.1-201ENST00000402231 743 ntBASIC17.77■□□□□ 0.44
DSC1Q08554 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 AC002472.2-201ENST00000442739 958 ntBASIC17.77■□□□□ 0.44
DSC1Q08554 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 TSPY16P-201ENST00000449843 468 ntBASIC17.77■□□□□ 0.44
DSC1Q08554 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.77■□□□□ 0.44
DSC1Q08554 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.77■□□□□ 0.44
DSC1Q08554 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DSC1Q08554 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DSC1Q08554 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DSC1Q08554 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.77■□□□□ 0.43
DSC1Q08554 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
DSC1Q08554 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
DSC1Q08554 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.77■□□□□ 0.43
DSC1Q08554 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DSC1Q08554 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.77■□□□□ 0.43
DSC1Q08554 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
DSC1Q08554 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.77■□□□□ 0.43
DSC1Q08554 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
DSC1Q08554 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.77■□□□□ 0.43
DSC1Q08554 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.77■□□□□ 0.43
DSC1Q08554 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DSC1Q08554 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.76■□□□□ 0.43
DSC1Q08554 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 AC004890.2-204ENST00000481968 304 ntBASIC17.76■□□□□ 0.43
DSC1Q08554 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.76■□□□□ 0.43
DSC1Q08554 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DSC1Q08554 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.76■□□□□ 0.43
DSC1Q08554 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
DSC1Q08554 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms