Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX3P78415 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
IRX3P78415 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IRX3P78415 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.62■□□□□ 0.73
IRX3P78415 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 KRT8P23-201ENST00000560090 1207 ntBASIC19.62■□□□□ 0.73
IRX3P78415 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.62■□□□□ 0.73
IRX3P78415 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IRX3P78415 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.62■□□□□ 0.73
IRX3P78415 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IRX3P78415 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IRX3P78415 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IRX3P78415 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IRX3P78415 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.61■□□□□ 0.73
IRX3P78415 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.61■□□□□ 0.73
IRX3P78415 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
IRX3P78415 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.61■□□□□ 0.73
IRX3P78415 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.61■□□□□ 0.73
IRX3P78415 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
IRX3P78415 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.61■□□□□ 0.73
IRX3P78415 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.61■□□□□ 0.73
IRX3P78415 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
IRX3P78415 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IRX3P78415 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 AL353732.1-201ENST00000569618 1459 ntBASIC19.6■□□□□ 0.73
IRX3P78415 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
IRX3P78415 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.6■□□□□ 0.73
IRX3P78415 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.6■□□□□ 0.73
IRX3P78415 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX3P78415 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.6■□□□□ 0.73
IRX3P78415 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 AC109635.5-201ENST00000533593 962 ntBASIC19.6■□□□□ 0.73
IRX3P78415 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.6■□□□□ 0.73
IRX3P78415 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms