Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.41■□□□□ 0.06
CXCR4P61073 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.41■□□□□ 0.06
CXCR4P61073 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 AL390719.2-201ENST00000606993 987 ntBASIC15.41■□□□□ 0.06
CXCR4P61073 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CXCR4P61073 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.41■□□□□ 0.06
CXCR4P61073 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CXCR4P61073 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.41■□□□□ 0.06
CXCR4P61073 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CXCR4P61073 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 Z83836.1-201ENST00000624605 1642 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 TERF1P1-201ENST00000311003 1181 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CXCR4P61073 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 AC103564.2-201ENST00000432853 1299 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 AC112907.2-201ENST00000448639 330 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.4■□□□□ 0.06
CXCR4P61073 AC122714.2-201ENST00000502787 707 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 AC093827.2-201ENST00000512654 315 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 VENTXP5-201ENST00000523979 775 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.4■□□□□ 0.06
CXCR4P61073 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.4■□□□□ 0.06
CXCR4P61073 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.4■□□□□ 0.06
CXCR4P61073 AC005363.2-201ENST00000618631 242 ntBASIC15.4■□□□□ 0.06
CXCR4P61073 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.4■□□□□ 0.06
CXCR4P61073 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CXCR4P61073 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXCR4P61073 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CXCR4P61073 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CXCR4P61073 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 FAM45BP-202ENST00000592932 1624 ntBASIC15.39■□□□□ 0.05
CXCR4P61073 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CXCR4P61073 AC010491.1-201ENST00000563101 2797 ntBASIC15.39■□□□□ 0.05
CXCR4P61073 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.39■□□□□ 0.05
CXCR4P61073 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.39■□□□□ 0.05
CXCR4P61073 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXCR4P61073 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms