Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 NUS1P3-201ENST00000423502 862 ntBASIC14□□□□□ -0.17
RIPPLY3P57055 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14□□□□□ -0.17
RIPPLY3P57055 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RIPPLY3P57055 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RIPPLY3P57055 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RIPPLY3P57055 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14□□□□□ -0.17
RIPPLY3P57055 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 AL596257.1-201ENST00000641463 2694 ntBASIC13.99□□□□□ -0.17
RIPPLY3P57055 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FAM185BP-201ENST00000443595 716 ntBASIC13.99□□□□□ -0.17
RIPPLY3P57055 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 AC008735.3-201ENST00000596646 500 ntBASIC13.99□□□□□ -0.17
RIPPLY3P57055 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RIPPLY3P57055 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.99□□□□□ -0.17
RIPPLY3P57055 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RIPPLY3P57055 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
RIPPLY3P57055 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RIPPLY3P57055 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RIPPLY3P57055 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms