Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
CMC4P56277 AC074386.1-202ENST00000463561 864 ntBASIC12.55□□□□□ -0.4
CMC4P56277 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.55□□□□□ -0.4
CMC4P56277 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.55□□□□□ -0.4
CMC4P56277 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.55□□□□□ -0.4
CMC4P56277 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 OR7E47P-204ENST00000575924 449 ntBASIC12.55□□□□□ -0.4
CMC4P56277 MIR3909-201ENST00000579518 119 ntBASIC12.55□□□□□ -0.4
CMC4P56277 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 BCAR1-209ENST00000546196 1340 ntBASIC12.55□□□□□ -0.4
CMC4P56277 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.55□□□□□ -0.4
CMC4P56277 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.55□□□□□ -0.4
CMC4P56277 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CMC4P56277 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 AC108860.2-201ENST00000562760 2183 ntBASIC12.54□□□□□ -0.4
CMC4P56277 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CMC4P56277 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.54□□□□□ -0.4
CMC4P56277 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
CMC4P56277 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.54□□□□□ -0.4
CMC4P56277 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.54□□□□□ -0.4
CMC4P56277 MIR940-201ENST00000401276 94 ntBASIC12.54□□□□□ -0.4
CMC4P56277 AC007967.2-201ENST00000432613 625 ntBASIC12.54□□□□□ -0.4
CMC4P56277 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.54□□□□□ -0.4
CMC4P56277 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 SLC25A1P1-201ENST00000528351 927 ntBASIC12.54□□□□□ -0.4
CMC4P56277 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CMC4P56277 AC107918.2-201ENST00000530817 355 ntBASIC12.54□□□□□ -0.4
CMC4P56277 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.54□□□□□ -0.4
CMC4P56277 DUX4L17-201ENST00000557360 1267 ntBASIC12.54□□□□□ -0.4
CMC4P56277 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.54□□□□□ -0.4
CMC4P56277 MIR3687-2-201ENST00000577708 61 ntBASIC12.54□□□□□ -0.4
CMC4P56277 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
CMC4P56277 AC021097.1-201ENST00000607902 574 ntBASIC12.54□□□□□ -0.4
CMC4P56277 MIR3687-1-201ENST00000614492 61 ntBASIC12.54□□□□□ -0.4
CMC4P56277 AL161645.1-201ENST00000622716 1255 ntBASIC12.54□□□□□ -0.4
CMC4P56277 AC004877.2-201ENST00000623941 599 ntBASIC12.54□□□□□ -0.4
CMC4P56277 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.54□□□□□ -0.4
CMC4P56277 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 AC006277.1-201ENST00000624348 1610 ntBASIC12.54□□□□□ -0.4
CMC4P56277 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms