Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SUMO3P55854 AL022342.1-201ENST00000400363 863 ntBASIC15.25■□□□□ 0.03
SUMO3P55854 AC007967.2-201ENST00000432613 625 ntBASIC15.25■□□□□ 0.03
SUMO3P55854 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SUMO3P55854 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SUMO3P55854 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.25■□□□□ 0.03
SUMO3P55854 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.25■□□□□ 0.03
SUMO3P55854 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.25■□□□□ 0.03
SUMO3P55854 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SUMO3P55854 HLA-A-202ENST00000376806 1854 ntBASIC15.25■□□□□ 0.03
SUMO3P55854 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SUMO3P55854 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.24■□□□□ 0.03
SUMO3P55854 SNX33P1-201ENST00000592116 1762 ntBASIC15.24■□□□□ 0.03
SUMO3P55854 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.24■□□□□ 0.03
SUMO3P55854 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SUMO3P55854 KRT18P3-201ENST00000451602 1288 ntBASIC15.24■□□□□ 0.03
SUMO3P55854 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.24■□□□□ 0.03
SUMO3P55854 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.24■□□□□ 0.03
SUMO3P55854 AC140113.2-201ENST00000604370 208 ntBASIC15.24■□□□□ 0.03
SUMO3P55854 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SUMO3P55854 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SUMO3P55854 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 NKILA-202ENST00000614771 2598 ntBASIC15.24■□□□□ 0.03
SUMO3P55854 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SUMO3P55854 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 RNF216P1-203ENST00000404404 2427 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SUMO3P55854 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SUMO3P55854 RNU1-129P-201ENST00000384064 167 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.23■□□□□ 0.03
SUMO3P55854 HMGA1P7-201ENST00000406908 502 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.23■□□□□ 0.03
SUMO3P55854 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
SUMO3P55854 KRT18P58-201ENST00000527480 1120 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.23■□□□□ 0.03
SUMO3P55854 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.23■□□□□ 0.03
SUMO3P55854 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.23■□□□□ 0.03
SUMO3P55854 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.23■□□□□ 0.03
SUMO3P55854 U1.21-201ENST00000580816 167 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 AC021097.1-201ENST00000607902 574 ntBASIC15.23■□□□□ 0.03
SUMO3P55854 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SUMO3P55854 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
SUMO3P55854 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SUMO3P55854 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms