Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PAX9P55771 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX9P55771 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 GGT4P-201ENST00000623672 1708 ntBASIC13.57□□□□□ -0.24
PAX9P55771 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 AL845331.1-201ENST00000424978 1190 ntBASIC13.57□□□□□ -0.24
PAX9P55771 LIN28AP1-201ENST00000429574 405 ntBASIC13.57□□□□□ -0.24
PAX9P55771 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.57□□□□□ -0.24
PAX9P55771 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
PAX9P55771 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
PAX9P55771 VENTXP5-201ENST00000523979 775 ntBASIC13.57□□□□□ -0.24
PAX9P55771 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.57□□□□□ -0.24
PAX9P55771 AC013467.2-201ENST00000605472 835 ntBASIC13.57□□□□□ -0.24
PAX9P55771 AD001527.2-201ENST00000622994 785 ntBASIC13.57□□□□□ -0.24
PAX9P55771 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX9P55771 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.57□□□□□ -0.24
PAX9P55771 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PAX9P55771 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.57□□□□□ -0.24
PAX9P55771 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
PAX9P55771 KLF4P1-201ENST00000412782 1185 ntBASIC13.56□□□□□ -0.24
PAX9P55771 AC113347.1-201ENST00000413321 391 ntBASIC13.56□□□□□ -0.24
PAX9P55771 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 ATP5G1P1-201ENST00000448724 379 ntBASIC13.56□□□□□ -0.24
PAX9P55771 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.56□□□□□ -0.24
PAX9P55771 AC133561.5-201ENST00000635547 218 ntBASIC13.56□□□□□ -0.24
PAX9P55771 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.56□□□□□ -0.24
PAX9P55771 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.56□□□□□ -0.24
PAX9P55771 AC006277.1-201ENST00000624348 1610 ntBASIC13.56□□□□□ -0.24
PAX9P55771 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 AC022532.1-201ENST00000624563 1728 ntBASIC13.56□□□□□ -0.24
PAX9P55771 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PAX9P55771 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PAX9P55771 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PAX9P55771 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PAX9P55771 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms