Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 ARMC10P1-201ENST00000313754 855 ntBASIC16.54■□□□□ 0.24
CDH13P55290 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CDH13P55290 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 KRT16P4-201ENST00000453883 522 ntBASIC16.54■□□□□ 0.24
CDH13P55290 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH13P55290 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH13P55290 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AL445228.2-201ENST00000605589 952 ntBASIC16.54■□□□□ 0.24
CDH13P55290 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 PCDHA1-201ENST00000378133 2726 ntBASIC16.54■□□□□ 0.24
CDH13P55290 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
CDH13P55290 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH13P55290 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH13P55290 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CDH13P55290 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH13P55290 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CDH13P55290 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 AC026691.1-201ENST00000602502 2017 ntBASIC16.53■□□□□ 0.24
CDH13P55290 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 FOSL1P1-201ENST00000511041 816 ntBASIC16.53■□□□□ 0.24
CDH13P55290 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.53■□□□□ 0.24
CDH13P55290 AL353135.1-201ENST00000606729 504 ntBASIC16.53■□□□□ 0.24
CDH13P55290 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH13P55290 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH13P55290 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH13P55290 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH13P55290 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH13P55290 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH13P55290 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDH13P55290 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CDH13P55290 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH13P55290 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH13P55290 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH13P55290 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH13P55290 AL732292.2-201ENST00000609649 430 ntBASIC16.52■□□□□ 0.24
CDH13P55290 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH13P55290 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH13P55290 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH13P55290 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDH13P55290 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.52■□□□□ 0.23
CDH13P55290 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH13P55290 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms