Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.97■□□□□ 0.63
EPHB4P54760 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 MIR943-201ENST00000401286 94 ntBASIC18.97■□□□□ 0.63
EPHB4P54760 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB4P54760 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB4P54760 AP005018.1-201ENST00000525475 301 ntBASIC18.97■□□□□ 0.63
EPHB4P54760 DUX4L17-201ENST00000557360 1267 ntBASIC18.97■□□□□ 0.63
EPHB4P54760 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.97■□□□□ 0.63
EPHB4P54760 AC026120.1-201ENST00000611536 926 ntBASIC18.97■□□□□ 0.63
EPHB4P54760 ACTL9-202ENST00000612068 1252 ntBASIC18.97■□□□□ 0.63
EPHB4P54760 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB4P54760 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
EPHB4P54760 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
EPHB4P54760 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 AC093010.1-201ENST00000473625 1624 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 FAM58DP-201ENST00000428076 619 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 AC005237.2-201ENST00000434368 219 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 DDX43P3-201ENST00000441064 443 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 STK19B-204ENST00000512515 211 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.96■□□□□ 0.63
EPHB4P54760 AC112191.1-201ENST00000523689 701 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 AL008721.1-201ENST00000609964 604 ntBASIC18.96■□□□□ 0.63
EPHB4P54760 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHB4P54760 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB4P54760 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
EPHB4P54760 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EPHB4P54760 KRT18P55-202ENST00000578578 1546 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EPHB4P54760 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EPHB4P54760 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB4P54760 AL355306.1-201ENST00000415580 579 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB4P54760 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB4P54760 CNN2P2-201ENST00000443536 909 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 CNN2P3-201ENST00000450201 906 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHB4P54760 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHB4P54760 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB4P54760 AC099522.2-201ENST00000607001 744 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHB4P54760 AL136317.3-201ENST00000618497 906 ntBASIC18.95■□□□□ 0.62
EPHB4P54760 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EPHB4P54760 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHB4P54760 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHB4P54760 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms