Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK2P49760 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLK2P49760 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK2P49760 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLK2P49760 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLK2P49760 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CLK2P49760 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19■□□□□ 0.63
CLK2P49760 WASH6P-202ENST00000359512 1437 ntBASIC19■□□□□ 0.63
CLK2P49760 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CLK2P49760 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 PCDHA12-202ENST00000613593 2588 ntBASIC19■□□□□ 0.63
CLK2P49760 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19■□□□□ 0.63
CLK2P49760 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CLK2P49760 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 TFAMP1-201ENST00000412727 736 ntBASIC19■□□□□ 0.63
CLK2P49760 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CLK2P49760 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19■□□□□ 0.63
CLK2P49760 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19■□□□□ 0.63
CLK2P49760 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19■□□□□ 0.63
CLK2P49760 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19■□□□□ 0.63
CLK2P49760 AC026120.1-201ENST00000611536 926 ntBASIC19■□□□□ 0.63
CLK2P49760 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19■□□□□ 0.63
CLK2P49760 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19■□□□□ 0.63
CLK2P49760 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLK2P49760 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK2P49760 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.99■□□□□ 0.63
CLK2P49760 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 FAM86C2P-203ENST00000528684 1004 ntBASIC18.99■□□□□ 0.63
CLK2P49760 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.99■□□□□ 0.63
CLK2P49760 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 AC022145.2-201ENST00000598203 171 ntBASIC18.99■□□□□ 0.63
CLK2P49760 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.99■□□□□ 0.63
CLK2P49760 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.99■□□□□ 0.63
CLK2P49760 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK2P49760 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK2P49760 AL691403.2-201ENST00000618460 490 ntBASIC18.99■□□□□ 0.63
CLK2P49760 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK2P49760 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.99■□□□□ 0.63
CLK2P49760 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.99■□□□□ 0.63
CLK2P49760 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLK2P49760 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.99■□□□□ 0.63
CLK2P49760 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.98■□□□□ 0.63
CLK2P49760 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
CLK2P49760 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLK2P49760 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 AC254562.1-201ENST00000417586 456 ntBASIC18.98■□□□□ 0.63
CLK2P49760 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.98■□□□□ 0.63
CLK2P49760 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLK2P49760 DNAJB3-202ENST00000449667 1266 ntBASIC18.98■□□□□ 0.63
CLK2P49760 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms