Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.87□□□□□ -0.03
CX3CR1P49238 AL121772.3-201ENST00000610840 674 ntBASIC14.87□□□□□ -0.03
CX3CR1P49238 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.87□□□□□ -0.03
CX3CR1P49238 AL139288.1-201ENST00000623748 933 ntBASIC14.87□□□□□ -0.03
CX3CR1P49238 AL022326.1-202ENST00000641533 845 ntBASIC14.87□□□□□ -0.03
CX3CR1P49238 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.87□□□□□ -0.03
CX3CR1P49238 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.87□□□□□ -0.03
CX3CR1P49238 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.87□□□□□ -0.03
CX3CR1P49238 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.87□□□□□ -0.03
CX3CR1P49238 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 AL603756.1-201ENST00000606511 2163 ntBASIC14.87□□□□□ -0.03
CX3CR1P49238 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CX3CR1P49238 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.87□□□□□ -0.03
CX3CR1P49238 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.87□□□□□ -0.03
CX3CR1P49238 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CX3CR1P49238 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 AL356309.3-201ENST00000624132 1934 ntBASIC14.86□□□□□ -0.03
CX3CR1P49238 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 AP002414.1-201ENST00000391405 1147 ntBASIC14.86□□□□□ -0.03
CX3CR1P49238 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 PRYP5-201ENST00000451909 266 ntBASIC14.86□□□□□ -0.03
CX3CR1P49238 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.86□□□□□ -0.03
CX3CR1P49238 AL353135.1-201ENST00000606729 504 ntBASIC14.86□□□□□ -0.03
CX3CR1P49238 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.86□□□□□ -0.03
CX3CR1P49238 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 AC008894.3-201ENST00000624324 3103 ntBASIC14.86□□□□□ -0.03
CX3CR1P49238 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.86□□□□□ -0.03
CX3CR1P49238 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.86□□□□□ -0.03
CX3CR1P49238 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CX3CR1P49238 AC243591.1-201ENST00000452967 1364 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CX3CR1P49238 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 AC079328.2-201ENST00000561241 3354 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CR1P49238 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
CX3CR1P49238 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.85□□□□□ -0.03
CX3CR1P49238 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 AL645728.1-201ENST00000366221 2101 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 DUX4L17-201ENST00000557360 1267 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 NKAPP1-205ENST00000585790 367 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 MTDHP3-201ENST00000594186 672 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 AC064862.7-201ENST00000604520 867 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CX3CR1P49238 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CR1P49238 AL590787.1-201ENST00000568856 1315 ntBASIC14.85□□□□□ -0.03
CX3CR1P49238 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.85□□□□□ -0.03
CX3CR1P49238 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CX3CR1P49238 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CX3CR1P49238 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms