Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 PHGDH-209ENST00000641074 1780 ntBASIC16.28■□□□□ 0.2
CD97P48960 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 LAGE3P1-201ENST00000425356 484 ntBASIC16.28■□□□□ 0.2
CD97P48960 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.28■□□□□ 0.2
CD97P48960 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.28■□□□□ 0.2
CD97P48960 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.28■□□□□ 0.2
CD97P48960 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 AC092364.2-202ENST00000597012 1073 ntBASIC16.28■□□□□ 0.2
CD97P48960 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.28■□□□□ 0.2
CD97P48960 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD97P48960 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.28■□□□□ 0.2
CD97P48960 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD97P48960 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 AC079776.2-201ENST00000641154 1609 ntBASIC16.27■□□□□ 0.2
CD97P48960 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.27■□□□□ 0.2
CD97P48960 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 PMPCAP1-201ENST00000508114 1576 ntBASIC16.27■□□□□ 0.2
CD97P48960 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.27■□□□□ 0.2
CD97P48960 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD97P48960 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.27■□□□□ 0.2
CD97P48960 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CD97P48960 FAM8A3P-201ENST00000427218 844 ntBASIC16.27■□□□□ 0.2
CD97P48960 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.27■□□□□ 0.2
CD97P48960 AC009947.1-201ENST00000444350 727 ntBASIC16.27■□□□□ 0.2
CD97P48960 YBX1P5-201ENST00000509441 847 ntBASIC16.27■□□□□ 0.2
CD97P48960 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.27■□□□□ 0.2
CD97P48960 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.27■□□□□ 0.2
CD97P48960 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.27■□□□□ 0.2
CD97P48960 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.27■□□□□ 0.2
CD97P48960 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.27■□□□□ 0.2
CD97P48960 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CD97P48960 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CD97P48960 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.27■□□□□ 0.19
CD97P48960 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.27■□□□□ 0.19
CD97P48960 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CD97P48960 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.27■□□□□ 0.19
CD97P48960 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.27■□□□□ 0.19
CD97P48960 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD97P48960 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.27■□□□□ 0.19
CD97P48960 AC132872.4-202ENST00000622924 2756 ntBASIC16.26■□□□□ 0.19
CD97P48960 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD97P48960 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CD97P48960 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.26■□□□□ 0.19
CD97P48960 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.26■□□□□ 0.19
CD97P48960 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.26■□□□□ 0.19
CD97P48960 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.26■□□□□ 0.19
CD97P48960 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CD97P48960 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD97P48960 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms