Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MIR1224-201ENST00000408193 85 ntBASIC16.41■□□□□ 0.22
KRT6CP48668 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT6CP48668 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6CP48668 DUX4L17-201ENST00000557360 1267 ntBASIC16.41■□□□□ 0.22
KRT6CP48668 MIR3652-201ENST00000579335 131 ntBASIC16.41■□□□□ 0.22
KRT6CP48668 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT6CP48668 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6CP48668 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
KRT6CP48668 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6CP48668 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6CP48668 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT6CP48668 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6CP48668 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6CP48668 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 AC243591.1-201ENST00000452967 1364 ntBASIC16.4■□□□□ 0.22
KRT6CP48668 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 AL391256.1-201ENST00000443260 1855 ntBASIC16.4■□□□□ 0.22
KRT6CP48668 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT6CP48668 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT6CP48668 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 UPK3BP1-201ENST00000428678 509 ntBASIC16.4■□□□□ 0.22
KRT6CP48668 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6CP48668 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT6CP48668 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 AL121772.3-201ENST00000610840 674 ntBASIC16.4■□□□□ 0.22
KRT6CP48668 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 AC092171.3-201ENST00000610122 2651 ntBASIC16.4■□□□□ 0.22
KRT6CP48668 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6CP48668 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6CP48668 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
KRT6CP48668 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT6CP48668 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 AC103702.1-201ENST00000548801 2630 ntBASIC16.39■□□□□ 0.21
KRT6CP48668 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 KRT8P49-201ENST00000604166 1432 ntBASIC16.39■□□□□ 0.21
KRT6CP48668 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT6CP48668 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 NKAPP1-205ENST00000585790 367 ntBASIC16.39■□□□□ 0.21
KRT6CP48668 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 TERC-201ENST00000602385 541 ntBASIC16.39■□□□□ 0.21
KRT6CP48668 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT6CP48668 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT6CP48668 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT6CP48668 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms