Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.88□□□□□ -0.03
THBS4P35443 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
THBS4P35443 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
THBS4P35443 MIR940-201ENST00000401276 94 ntBASIC14.88□□□□□ -0.03
THBS4P35443 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 AC145285.3-201ENST00000564603 959 ntBASIC14.88□□□□□ -0.03
THBS4P35443 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 Z83851.2-201ENST00000609564 659 ntBASIC14.88□□□□□ -0.03
THBS4P35443 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 AL513477.1-201ENST00000602865 2407 ntBASIC14.88□□□□□ -0.03
THBS4P35443 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
THBS4P35443 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
THBS4P35443 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
THBS4P35443 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS4P35443 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
THBS4P35443 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 MST1L-201ENST00000442552 2185 ntBASIC14.87□□□□□ -0.03
THBS4P35443 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
THBS4P35443 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 ACTG1P4-201ENST00000425123 1122 ntBASIC14.87□□□□□ -0.03
THBS4P35443 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 AL671883.3-201ENST00000603274 991 ntBASIC14.87□□□□□ -0.03
THBS4P35443 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.87□□□□□ -0.03
THBS4P35443 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 FLJ38576-201ENST00000623820 2459 ntBASIC14.87□□□□□ -0.03
THBS4P35443 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
THBS4P35443 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THBS4P35443 AC092068.3-201ENST00000587894 2016 ntBASIC14.87□□□□□ -0.03
THBS4P35443 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS4P35443 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS4P35443 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
THBS4P35443 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
THBS4P35443 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
THBS4P35443 PCDHA14-201ENST00000506751 2298 ntBASIC14.86□□□□□ -0.03
THBS4P35443 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.86□□□□□ -0.03
THBS4P35443 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS4P35443 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
THBS4P35443 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.86□□□□□ -0.03
THBS4P35443 PMS2P1-201ENST00000431037 1228 ntBASIC14.86□□□□□ -0.03
THBS4P35443 AC009947.1-201ENST00000444350 727 ntBASIC14.86□□□□□ -0.03
THBS4P35443 RPS15P9-201ENST00000494093 319 ntBASIC14.86□□□□□ -0.03
THBS4P35443 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS4P35443 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.86□□□□□ -0.03
THBS4P35443 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.86□□□□□ -0.03
THBS4P35443 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms