Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 SPDYE17-201ENST00000412399 783 ntBASIC19.91■□□□□ 0.78
COL4A5P29400 AC234783.1-201ENST00000441761 496 ntBASIC19.91■□□□□ 0.78
COL4A5P29400 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A5P29400 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A5P29400 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL4A5P29400 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COL4A5P29400 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A5P29400 MIR4538-201ENST00000581377 78 ntBASIC19.91■□□□□ 0.78
COL4A5P29400 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A5P29400 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
COL4A5P29400 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A5P29400 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A5P29400 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL4A5P29400 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A5P29400 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A5P29400 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A5P29400 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.91■□□□□ 0.78
COL4A5P29400 AC092337.1-201ENST00000568699 1129 ntBASIC19.91■□□□□ 0.78
COL4A5P29400 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.91■□□□□ 0.78
COL4A5P29400 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A5P29400 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A5P29400 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A5P29400 AC087289.5-201ENST00000586076 3175 ntBASIC19.9■□□□□ 0.78
COL4A5P29400 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A5P29400 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL4A5P29400 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL4A5P29400 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A5P29400 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.9■□□□□ 0.78
COL4A5P29400 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.9■□□□□ 0.78
COL4A5P29400 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.9■□□□□ 0.78
COL4A5P29400 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A5P29400 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
COL4A5P29400 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL4A5P29400 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A5P29400 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.89■□□□□ 0.78
COL4A5P29400 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A5P29400 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A5P29400 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A5P29400 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A5P29400 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
COL4A5P29400 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.78
COL4A5P29400 AC006277.1-201ENST00000624348 1610 ntBASIC19.89■□□□□ 0.78
COL4A5P29400 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL4A5P29400 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL4A5P29400 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A5P29400 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.89■□□□□ 0.77
COL4A5P29400 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.89■□□□□ 0.77
COL4A5P29400 AC007389.4-201ENST00000454674 793 ntBASIC19.89■□□□□ 0.77
COL4A5P29400 SERBP1P3-201ENST00000459980 809 ntBASIC19.89■□□□□ 0.77
COL4A5P29400 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A5P29400 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.89■□□□□ 0.77
COL4A5P29400 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.89■□□□□ 0.77
COL4A5P29400 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A5P29400 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL4A5P29400 AC093726.1-201ENST00000608064 963 ntBASIC19.89■□□□□ 0.77
COL4A5P29400 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A5P29400 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A5P29400 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL4A5P29400 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.89■□□□□ 0.77
COL4A5P29400 AL138688.1-201ENST00000624851 1594 ntBASIC19.88■□□□□ 0.77
COL4A5P29400 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A5P29400 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A5P29400 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL4A5P29400 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms