Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC00982-205ENST00000420957 435 ntBASIC16.03■□□□□ 0.16
PTPN6P29350 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN6P29350 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN6P29350 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN6P29350 ME2P1-201ENST00000426028 1970 ntBASIC16.03■□□□□ 0.16
PTPN6P29350 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN6P29350 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN6P29350 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN6P29350 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN6P29350 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN6P29350 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN6P29350 AL139384.1-201ENST00000612143 3047 ntBASIC16.03■□□□□ 0.16
PTPN6P29350 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
PTPN6P29350 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN6P29350 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN6P29350 AC079776.2-201ENST00000641154 1609 ntBASIC16.02■□□□□ 0.16
PTPN6P29350 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 AC006538.1-201ENST00000567905 1585 ntBASIC16.02■□□□□ 0.16
PTPN6P29350 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PTPN6P29350 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN6P29350 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN6P29350 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN6P29350 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN6P29350 FDX1P1-201ENST00000449115 551 ntBASIC16.02■□□□□ 0.16
PTPN6P29350 AC009078.2-202ENST00000463353 338 ntBASIC16.02■□□□□ 0.16
PTPN6P29350 HLA-J-202ENST00000469281 1241 ntBASIC16.02■□□□□ 0.16
PTPN6P29350 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN6P29350 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN6P29350 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN6P29350 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
PTPN6P29350 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN6P29350 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.02■□□□□ 0.15
PTPN6P29350 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN6P29350 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN6P29350 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN6P29350 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.01■□□□□ 0.15
PTPN6P29350 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN6P29350 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN6P29350 FER1L4-210ENST00000615531 5998 ntBASIC16.01■□□□□ 0.15
PTPN6P29350 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms