Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.29■□□□□ 0.04
GDF1P27539 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
GDF1P27539 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 AC131009.4-201ENST00000624048 1740 ntBASIC15.29■□□□□ 0.04
GDF1P27539 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GDF1P27539 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GDF1P27539 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF1P27539 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.28■□□□□ 0.04
GDF1P27539 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
GDF1P27539 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
GDF1P27539 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.28■□□□□ 0.04
GDF1P27539 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GDF1P27539 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.28■□□□□ 0.04
GDF1P27539 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GDF1P27539 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GDF1P27539 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.28■□□□□ 0.04
GDF1P27539 MPDU1-223ENST00000582151 728 ntBASIC15.28■□□□□ 0.04
GDF1P27539 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.28■□□□□ 0.04
GDF1P27539 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.28■□□□□ 0.04
GDF1P27539 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
GDF1P27539 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GDF1P27539 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GDF1P27539 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.27■□□□□ 0.04
GDF1P27539 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GDF1P27539 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
GDF1P27539 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 AC254562.1-201ENST00000417586 456 ntBASIC15.27■□□□□ 0.04
GDF1P27539 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.27■□□□□ 0.04
GDF1P27539 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 AC092183.1-201ENST00000469884 875 ntBASIC15.27■□□□□ 0.04
GDF1P27539 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.27■□□□□ 0.04
GDF1P27539 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.27■□□□□ 0.04
GDF1P27539 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.27■□□□□ 0.04
GDF1P27539 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.27■□□□□ 0.04
GDF1P27539 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.27■□□□□ 0.04
GDF1P27539 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GDF1P27539 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GDF1P27539 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GDF1P27539 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
GDF1P27539 AC092068.3-201ENST00000587894 2016 ntBASIC15.27■□□□□ 0.03
GDF1P27539 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.27■□□□□ 0.03
GDF1P27539 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GDF1P27539 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GDF1P27539 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.27■□□□□ 0.03
GDF1P27539 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GDF1P27539 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GDF1P27539 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms