Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL8A2P25067 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 AC011676.5-201ENST00000624864 2660 ntBASIC14.25□□□□□ -0.13
COL8A2P25067 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
COL8A2P25067 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COL8A2P25067 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL8A2P25067 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL8A2P25067 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
COL8A2P25067 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.24□□□□□ -0.13
COL8A2P25067 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.24□□□□□ -0.13
COL8A2P25067 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.24□□□□□ -0.13
COL8A2P25067 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.24□□□□□ -0.13
COL8A2P25067 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.24□□□□□ -0.13
COL8A2P25067 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.24□□□□□ -0.13
COL8A2P25067 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 AC012569.1-201ENST00000591191 1524 ntBASIC14.24□□□□□ -0.13
COL8A2P25067 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
COL8A2P25067 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.24□□□□□ -0.13
COL8A2P25067 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL8A2P25067 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.24□□□□□ -0.13
COL8A2P25067 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.24□□□□□ -0.13
COL8A2P25067 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.23□□□□□ -0.13
COL8A2P25067 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 PRORSD1P-202ENST00000563365 2154 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 KRT18P28-201ENST00000453838 1332 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL8A2P25067 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 AC002056.1-201ENST00000395613 760 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.23□□□□□ -0.13
COL8A2P25067 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.23□□□□□ -0.13
COL8A2P25067 PMS2P2-201ENST00000425039 1128 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 AC140658.5-201ENST00000438532 169 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.23□□□□□ -0.13
COL8A2P25067 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.23□□□□□ -0.13
COL8A2P25067 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
COL8A2P25067 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
COL8A2P25067 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.23□□□□□ -0.13
COL8A2P25067 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 AL353732.1-201ENST00000569618 1459 ntBASIC14.23□□□□□ -0.13
COL8A2P25067 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL8A2P25067 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
COL8A2P25067 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.23□□□□□ -0.13
COL8A2P25067 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL8A2P25067 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COL8A2P25067 TOP3BP1-201ENST00000420768 1380 ntBASIC14.22□□□□□ -0.13
COL8A2P25067 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL8A2P25067 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms