Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
MMP8P22894 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP8P22894 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP8P22894 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.71■□□□□ 0.42
MMP8P22894 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
MMP8P22894 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP8P22894 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP8P22894 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.7■□□□□ 0.42
MMP8P22894 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.7■□□□□ 0.42
MMP8P22894 RNA5SP415-201ENST00000517246 115 ntBASIC17.7■□□□□ 0.42
MMP8P22894 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP8P22894 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP8P22894 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP8P22894 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.7■□□□□ 0.42
MMP8P22894 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.7■□□□□ 0.42
MMP8P22894 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MMP8P22894 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MMP8P22894 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MMP8P22894 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.7■□□□□ 0.42
MMP8P22894 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MMP8P22894 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MMP8P22894 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP8P22894 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 AL031731.1-201ENST00000642131 2094 ntBASIC17.69■□□□□ 0.42
MMP8P22894 GGT3P-204ENST00000453783 1664 ntBASIC17.69■□□□□ 0.42
MMP8P22894 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 VN2R19P-201ENST00000442399 1052 ntBASIC17.69■□□□□ 0.42
MMP8P22894 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.69■□□□□ 0.42
MMP8P22894 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.69■□□□□ 0.42
MMP8P22894 MIR4751-201ENST00000578027 74 ntBASIC17.69■□□□□ 0.42
MMP8P22894 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 AP001350.2-201ENST00000625104 1094 ntBASIC17.69■□□□□ 0.42
MMP8P22894 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 ME2P1-201ENST00000426028 1970 ntBASIC17.69■□□□□ 0.42
MMP8P22894 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 GGT4P-201ENST00000623672 1708 ntBASIC17.69■□□□□ 0.42
MMP8P22894 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
MMP8P22894 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MMP8P22894 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP8P22894 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP8P22894 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP8P22894 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP8P22894 CXCL1P1-201ENST00000502804 216 ntBASIC17.68■□□□□ 0.42
MMP8P22894 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms