Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC108073.2-201ENST00000464002 357 ntBASIC16.6■□□□□ 0.25
CDH3P22223 RNA5SP416-201ENST00000516838 111 ntBASIC16.6■□□□□ 0.25
CDH3P22223 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH3P22223 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH3P22223 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH3P22223 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH3P22223 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH3P22223 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH3P22223 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH3P22223 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH3P22223 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH3P22223 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH3P22223 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH3P22223 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH3P22223 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH3P22223 AP002414.1-201ENST00000391405 1147 ntBASIC16.59■□□□□ 0.25
CDH3P22223 CRYGEP-201ENST00000412192 528 ntBASIC16.59■□□□□ 0.25
CDH3P22223 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 IGHV3-65-201ENST00000523210 341 ntBASIC16.59■□□□□ 0.25
CDH3P22223 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH3P22223 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDH3P22223 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH3P22223 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 PI4KAP1-204ENST00000612579 1703 ntBASIC16.59■□□□□ 0.25
CDH3P22223 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH3P22223 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDH3P22223 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH3P22223 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDH3P22223 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH3P22223 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH3P22223 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH3P22223 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH3P22223 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH3P22223 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH3P22223 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CDH3P22223 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CDH3P22223 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH3P22223 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH3P22223 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH3P22223 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 GGTLC5P-201ENST00000617623 998 ntBASIC16.58■□□□□ 0.24
CDH3P22223 AC004790.2-201ENST00000623588 572 ntBASIC16.58■□□□□ 0.24
CDH3P22223 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 AL590787.1-201ENST00000568856 1315 ntBASIC16.58■□□□□ 0.24
CDH3P22223 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 AL121761.2-201ENST00000598007 1648 ntBASIC16.58■□□□□ 0.24
CDH3P22223 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CDH3P22223 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH3P22223 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 DOC2GP-204ENST00000639052 2548 ntBASIC16.58■□□□□ 0.24
CDH3P22223 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH3P22223 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH3P22223 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms