Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 RNU1-129P-201ENST00000384064 167 ntBASIC17.81■□□□□ 0.44
PTPN1P18031 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.81■□□□□ 0.44
PTPN1P18031 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PTPN1P18031 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN1P18031 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN1P18031 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN1P18031 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
PTPN1P18031 U1.21-201ENST00000580816 167 ntBASIC17.81■□□□□ 0.44
PTPN1P18031 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN1P18031 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 AL009183.1-201ENST00000603760 355 ntBASIC17.81■□□□□ 0.44
PTPN1P18031 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN1P18031 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN1P18031 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PTPN1P18031 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN1P18031 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN1P18031 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN1P18031 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 AL391256.1-201ENST00000443260 1855 ntBASIC17.8■□□□□ 0.44
PTPN1P18031 AL645728.1-201ENST00000366221 2101 ntBASIC17.8■□□□□ 0.44
PTPN1P18031 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN1P18031 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 AC004967.1-201ENST00000453589 447 ntBASIC17.8■□□□□ 0.44
PTPN1P18031 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN1P18031 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 AP002490.2-201ENST00000524791 560 ntBASIC17.8■□□□□ 0.44
PTPN1P18031 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN1P18031 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN1P18031 AL031055.1-201ENST00000606362 631 ntBASIC17.8■□□□□ 0.44
PTPN1P18031 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN1P18031 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN1P18031 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN1P18031 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN1P18031 AC005915.1-201ENST00000624912 2018 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN1P18031 PMS2P4-201ENST00000412466 1052 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 AC092474.2-201ENST00000424288 719 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 RPS8P6-201ENST00000426177 609 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
PTPN1P18031 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN1P18031 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN1P18031 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN1P18031 AC099522.2-201ENST00000607001 744 ntBASIC17.79■□□□□ 0.44
PTPN1P18031 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms