Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 AC106886.4-201ENST00000623557 2502 ntBASIC16.95■□□□□ 0.3
CTPS1P17812 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.95■□□□□ 0.3
CTPS1P17812 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.95■□□□□ 0.3
CTPS1P17812 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 MPDU1-223ENST00000582151 728 ntBASIC16.95■□□□□ 0.3
CTPS1P17812 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
CTPS1P17812 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CTPS1P17812 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTPS1P17812 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTPS1P17812 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTPS1P17812 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CTPS1P17812 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 AL353732.1-201ENST00000569618 1459 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 AD000864.1-201ENST00000624076 2295 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CTPS1P17812 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.94■□□□□ 0.3
CTPS1P17812 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTPS1P17812 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.94■□□□□ 0.3
CTPS1P17812 KRT19P2-202ENST00000557173 1012 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 AC005412.3-201ENST00000580309 715 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 AC023141.13-201ENST00000604991 943 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 AL645728.1-201ENST00000366221 2101 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.94■□□□□ 0.3
CTPS1P17812 CROCCP1-201ENST00000426910 5675 ntBASIC16.94■□□□□ 0.3
CTPS1P17812 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTPS1P17812 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS1P17812 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS1P17812 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS1P17812 AC007064.4-201ENST00000637740 555 ntBASIC16.93■□□□□ 0.3
CTPS1P17812 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.93■□□□□ 0.3
CTPS1P17812 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 AC131009.4-201ENST00000624048 1740 ntBASIC16.93■□□□□ 0.3
CTPS1P17812 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.93■□□□□ 0.3
CTPS1P17812 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTPS1P17812 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTPS1P17812 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms