Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.41■□□□□ 0.38
BRAFP15056 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.41■□□□□ 0.38
BRAFP15056 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
BRAFP15056 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.41■□□□□ 0.38
BRAFP15056 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.41■□□□□ 0.38
BRAFP15056 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 AL591684.3-201ENST00000605187 298 ntBASIC17.41■□□□□ 0.38
BRAFP15056 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.41■□□□□ 0.38
BRAFP15056 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 AC097374.2-201ENST00000618617 1306 ntBASIC17.41■□□□□ 0.38
BRAFP15056 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.41■□□□□ 0.38
BRAFP15056 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
BRAFP15056 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRAFP15056 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BRAFP15056 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
BRAFP15056 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.4■□□□□ 0.38
BRAFP15056 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.4■□□□□ 0.38
BRAFP15056 AC004870.1-201ENST00000315132 882 ntBASIC17.4■□□□□ 0.38
BRAFP15056 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BRAFP15056 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
BRAFP15056 AC096633.1-201ENST00000422446 749 ntBASIC17.4■□□□□ 0.38
BRAFP15056 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
BRAFP15056 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.4■□□□□ 0.38
BRAFP15056 LINC01711-201ENST00000598340 967 ntBASIC17.4■□□□□ 0.38
BRAFP15056 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
BRAFP15056 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.4■□□□□ 0.38
BRAFP15056 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 AC010460.3-201ENST00000511359 1579 ntBASIC17.4■□□□□ 0.38
BRAFP15056 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BRAFP15056 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
BRAFP15056 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRAFP15056 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
BRAFP15056 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BRAFP15056 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
BRAFP15056 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
BRAFP15056 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BRAFP15056 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 PAUPAR-201ENST00000630360 2965 ntBASIC17.39■□□□□ 0.37
BRAFP15056 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
BRAFP15056 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.39■□□□□ 0.37
BRAFP15056 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.39■□□□□ 0.37
BRAFP15056 AC007967.3-201ENST00000434308 558 ntBASIC17.39■□□□□ 0.37
BRAFP15056 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.39■□□□□ 0.37
BRAFP15056 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.39■□□□□ 0.37
BRAFP15056 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.39■□□□□ 0.37
BRAFP15056 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BRAFP15056 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 REXO1L6P-202ENST00000619970 1078 ntBASIC17.39■□□□□ 0.37
BRAFP15056 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.39■□□□□ 0.37
BRAFP15056 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.39■□□□□ 0.37
BRAFP15056 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BRAFP15056 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.39■□□□□ 0.37
BRAFP15056 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.39■□□□□ 0.37
BRAFP15056 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRAFP15056 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms