Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CFTRP13569 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC28.36■■■□□ 2.13
CFTRP13569 AC233724.13-201ENST00000598383 410 ntBASIC28.36■■■□□ 2.13
CFTRP13569 AL033527.5-201ENST00000641382 801 ntBASIC28.36■■■□□ 2.13
CFTRP13569 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC28.36■■■□□ 2.13
CFTRP13569 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFTRP13569 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC28.36■■■□□ 2.13
CFTRP13569 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC28.36■■■□□ 2.13
CFTRP13569 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CFTRP13569 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFTRP13569 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CFTRP13569 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CFTRP13569 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CFTRP13569 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC28.35■■■□□ 2.13
CFTRP13569 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 AC099336.1-201ENST00000417053 1171 ntBASIC28.35■■■□□ 2.13
CFTRP13569 IGHV3OR16-16-201ENST00000563644 343 ntBASIC28.35■■■□□ 2.13
CFTRP13569 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC28.35■■■□□ 2.13
CFTRP13569 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC28.35■■■□□ 2.13
CFTRP13569 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 PDIA3P1-201ENST00000471856 1510 ntBASIC28.35■■■□□ 2.13
CFTRP13569 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CFTRP13569 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFTRP13569 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 STX1A-203ENST00000395155 783 ntTSL 2 BASIC28.34■■■□□ 2.13
CFTRP13569 HIST3H2BA-201ENST00000436555 524 ntBASIC28.34■■■□□ 2.13
CFTRP13569 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC28.34■■■□□ 2.13
CFTRP13569 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC28.34■■■□□ 2.13
CFTRP13569 RARRES2P5-201ENST00000564013 466 ntBASIC28.34■■■□□ 2.13
CFTRP13569 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC28.34■■■□□ 2.13
CFTRP13569 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC28.34■■■□□ 2.13
CFTRP13569 AC020907.1-201ENST00000616460 1350 ntBASIC28.34■■■□□ 2.13
CFTRP13569 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC28.34■■■□□ 2.13
CFTRP13569 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 AC093525.8-201ENST00000624099 1342 ntBASIC28.34■■■□□ 2.13
CFTRP13569 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC28.34■■■□□ 2.13
CFTRP13569 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC28.34■■■□□ 2.13
CFTRP13569 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CFTRP13569 MIR5189-201ENST00000577370 114 ntBASIC28.34■■■□□ 2.13
CFTRP13569 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 MIR6069-201ENST00000620069 79 ntBASIC28.34■■■□□ 2.13
CFTRP13569 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC28.34■■■□□ 2.13
CFTRP13569 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC28.33■■■□□ 2.13
CFTRP13569 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC28.33■■■□□ 2.13
CFTRP13569 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CFTRP13569 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC28.33■■■□□ 2.13
CFTRP13569 PTK7-212ENST00000476760 902 ntTSL 2 BASIC28.33■■■□□ 2.13
CFTRP13569 BTNL10-201ENST00000595971 695 ntBASIC28.33■■■□□ 2.13
CFTRP13569 GPR182-203ENST00000622922 591 ntBASIC28.33■■■□□ 2.13
CFTRP13569 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CFTRP13569 AL138688.1-201ENST00000624851 1594 ntBASIC28.33■■■□□ 2.13
CFTRP13569 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC28.33■■■□□ 2.13
CFTRP13569 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC28.32■■■□□ 2.12
CFTRP13569 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC28.32■■■□□ 2.12
CFTRP13569 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CFTRP13569 AL354751.1-201ENST00000412768 1863 ntBASIC28.32■■■□□ 2.12
CFTRP13569 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CFTRP13569 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CFTRP13569 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC28.32■■■□□ 2.12
CFTRP13569 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC28.32■■■□□ 2.12
CFTRP13569 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC28.32■■■□□ 2.12
CFTRP13569 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CFTRP13569 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC28.32■■■□□ 2.12
CFTRP13569 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CFTRP13569 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CFTRP13569 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC28.31■■■□□ 2.12
CFTRP13569 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CFTRP13569 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms