Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT3P12035 AC092171.3-201ENST00000610122 2651 ntBASIC17.8■□□□□ 0.44
KRT3P12035 AL603756.1-201ENST00000606511 2163 ntBASIC17.8■□□□□ 0.44
KRT3P12035 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT3P12035 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT3P12035 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KRT3P12035 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT3P12035 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT3P12035 LINC00895-201ENST00000629028 1637 ntBASIC17.8■□□□□ 0.44
KRT3P12035 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT3P12035 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KRT3P12035 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT3P12035 SLC25A6P2-201ENST00000497974 877 ntBASIC17.79■□□□□ 0.44
KRT3P12035 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 AC008667.4-201ENST00000607370 168 ntBASIC17.79■□□□□ 0.44
KRT3P12035 AC005593.1-201ENST00000624894 515 ntBASIC17.79■□□□□ 0.44
KRT3P12035 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT3P12035 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
KRT3P12035 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT3P12035 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT3P12035 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KRT3P12035 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT3P12035 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT3P12035 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 TPM4P1-201ENST00000436100 807 ntBASIC17.78■□□□□ 0.44
KRT3P12035 IGHV3-65-201ENST00000523210 341 ntBASIC17.78■□□□□ 0.44
KRT3P12035 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT3P12035 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 REXO1L3P-201ENST00000622202 1288 ntBASIC17.78■□□□□ 0.44
KRT3P12035 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
KRT3P12035 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT3P12035 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT3P12035 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
KRT3P12035 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
KRT3P12035 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT3P12035 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT3P12035 AL031284.1-201ENST00000419297 478 ntBASIC17.77■□□□□ 0.44
KRT3P12035 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT3P12035 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.77■□□□□ 0.44
KRT3P12035 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT3P12035 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT3P12035 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.77■□□□□ 0.44
KRT3P12035 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
KRT3P12035 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.77■□□□□ 0.44
KRT3P12035 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT3P12035 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT3P12035 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT3P12035 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms