Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
UBL4AP11441 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UBL4AP11441 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.66■□□□□ 0.1
UBL4AP11441 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.66■□□□□ 0.1
UBL4AP11441 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.66■□□□□ 0.1
UBL4AP11441 RN7SL510P-201ENST00000581311 263 ntBASIC15.66■□□□□ 0.1
UBL4AP11441 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 TP73-AS1-207ENST00000624167 988 ntBASIC15.66■□□□□ 0.1
UBL4AP11441 AC107918.4-202ENST00000641623 219 ntBASIC15.66■□□□□ 0.1
UBL4AP11441 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
UBL4AP11441 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.66■□□□□ 0.1
UBL4AP11441 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.66■□□□□ 0.1
UBL4AP11441 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 AC105020.1-201ENST00000435356 2205 ntBASIC15.66■□□□□ 0.1
UBL4AP11441 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 AC243591.1-201ENST00000452967 1364 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 AP002414.1-201ENST00000391405 1147 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 FAAHP1-202ENST00000446499 1238 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 FAM197Y8-203ENST00000450145 560 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.65■□□□□ 0.1
UBL4AP11441 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 RNPS1P1-201ENST00000507437 918 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 OR7E14P-202ENST00000530490 1290 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 KRT126P-201ENST00000549467 1181 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.65■□□□□ 0.1
UBL4AP11441 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.65■□□□□ 0.1
UBL4AP11441 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.65■□□□□ 0.1
UBL4AP11441 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.65■□□□□ 0.1
UBL4AP11441 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 HYMAI-201ENST00000635591 3347 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.65■□□□□ 0.1
UBL4AP11441 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
UBL4AP11441 TUBB8P12-201ENST00000308911 1335 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 TUBB7P-202ENST00000428444 1305 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 TUBB8P7-204ENST00000567960 1332 ntBASIC15.65■□□□□ 0.1
UBL4AP11441 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.65■□□□□ 0.1
UBL4AP11441 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBL4AP11441 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBL4AP11441 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
UBL4AP11441 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
UBL4AP11441 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBL4AP11441 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms