Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.91■□□□□ 0.62
HOXC6P09630 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXC6P09630 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXC6P09630 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXC6P09630 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXC6P09630 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HOXC6P09630 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HOXC6P09630 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HOXC6P09630 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXC6P09630 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXC6P09630 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXC6P09630 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.9■□□□□ 0.62
HOXC6P09630 AC007274.1-201ENST00000439805 662 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 PRYP6-201ENST00000514804 343 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXC6P09630 TP53TG3HP-202ENST00000569755 579 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.9■□□□□ 0.62
HOXC6P09630 AL844908.2-201ENST00000609461 460 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 TEX28P1-201ENST00000613479 1221 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 TEX28P2-201ENST00000617764 1221 ntBASIC18.9■□□□□ 0.62
HOXC6P09630 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.9■□□□□ 0.62
HOXC6P09630 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXC6P09630 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC6P09630 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HOXC6P09630 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HOXC6P09630 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HOXC6P09630 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HOXC6P09630 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC6P09630 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HOXC6P09630 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC6P09630 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC6P09630 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXC6P09630 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC6P09630 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXC6P09630 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC6P09630 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC6P09630 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC6P09630 AL353705.2-201ENST00000428243 662 ntBASIC18.88■□□□□ 0.61
HOXC6P09630 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HOXC6P09630 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC6P09630 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXC6P09630 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms