Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
THBS1P07996 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
THBS1P07996 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
THBS1P07996 AC006449.5-201ENST00000610658 2098 ntBASIC15.53■□□□□ 0.08
THBS1P07996 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
THBS1P07996 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.53■□□□□ 0.08
THBS1P07996 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.53■□□□□ 0.08
THBS1P07996 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.53■□□□□ 0.08
THBS1P07996 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
THBS1P07996 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.53■□□□□ 0.08
THBS1P07996 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.53■□□□□ 0.08
THBS1P07996 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
THBS1P07996 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.53■□□□□ 0.08
THBS1P07996 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
THBS1P07996 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
THBS1P07996 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.53■□□□□ 0.08
THBS1P07996 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.53■□□□□ 0.08
THBS1P07996 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
THBS1P07996 CYP2T1P-202ENST00000641596 2535 ntBASIC15.53■□□□□ 0.08
THBS1P07996 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
THBS1P07996 AC006504.4-201ENST00000592118 1568 ntBASIC15.53■□□□□ 0.08
THBS1P07996 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THBS1P07996 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
THBS1P07996 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.52■□□□□ 0.08
THBS1P07996 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 KRT18P27-201ENST00000427733 1299 ntBASIC15.52■□□□□ 0.08
THBS1P07996 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
THBS1P07996 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.52■□□□□ 0.08
THBS1P07996 AL662844.1-201ENST00000546340 181 ntBASIC15.52■□□□□ 0.08
THBS1P07996 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 MIR4492-201ENST00000581627 80 ntBASIC15.52■□□□□ 0.08
THBS1P07996 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.52■□□□□ 0.08
THBS1P07996 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
THBS1P07996 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.52■□□□□ 0.08
THBS1P07996 GGTLC5P-201ENST00000617623 998 ntBASIC15.52■□□□□ 0.08
THBS1P07996 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
THBS1P07996 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.52■□□□□ 0.08
THBS1P07996 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
THBS1P07996 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
THBS1P07996 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.52■□□□□ 0.07
THBS1P07996 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.52■□□□□ 0.07
THBS1P07996 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.52■□□□□ 0.07
THBS1P07996 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.52■□□□□ 0.07
THBS1P07996 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THBS1P07996 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.52■□□□□ 0.07
THBS1P07996 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
THBS1P07996 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.51■□□□□ 0.07
THBS1P07996 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.51■□□□□ 0.07
THBS1P07996 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THBS1P07996 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms