Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DQB2P05538 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.09■□□□□ 0.33
HLA-DQB2P05538 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 AC010507.1-201ENST00000633895 436 ntBASIC17.09■□□□□ 0.33
HLA-DQB2P05538 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DQB2P05538 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-DQB2P05538 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC007967.2-201ENST00000432613 625 ntBASIC17.08■□□□□ 0.32
HLA-DQB2P05538 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC087641.1-201ENST00000557561 1021 ntBASIC17.08■□□□□ 0.32
HLA-DQB2P05538 AC064836.3-201ENST00000607928 673 ntBASIC17.08■□□□□ 0.32
HLA-DQB2P05538 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HLA-DQB2P05538 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 AC006538.1-201ENST00000567905 1585 ntBASIC17.07■□□□□ 0.32
HLA-DQB2P05538 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms