Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AL844908.2-201ENST00000609461 460 ntBASIC18.91■□□□□ 0.62
HMGCRP04035 IGHV3-72-202ENST00000621503 303 ntBASIC18.91■□□□□ 0.62
HMGCRP04035 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HMGCRP04035 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGCRP04035 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMGCRP04035 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGCRP04035 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCRP04035 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGCRP04035 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCRP04035 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCRP04035 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCRP04035 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCRP04035 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMGCRP04035 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCRP04035 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCRP04035 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HMGCRP04035 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HMGCRP04035 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCRP04035 INE1-201ENST00000456273 945 ntBASIC18.9■□□□□ 0.62
HMGCRP04035 KRT18P34-201ENST00000488218 1270 ntBASIC18.9■□□□□ 0.62
HMGCRP04035 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCRP04035 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCRP04035 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCRP04035 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.9■□□□□ 0.62
HMGCRP04035 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 AC131009.4-201ENST00000624048 1740 ntBASIC18.9■□□□□ 0.62
HMGCRP04035 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 CETN4P-206ENST00000642099 2168 ntBASIC18.9■□□□□ 0.62
HMGCRP04035 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCRP04035 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HMGCRP04035 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCRP04035 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCRP04035 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.89■□□□□ 0.62
HMGCRP04035 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.89■□□□□ 0.62
HMGCRP04035 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.89■□□□□ 0.62
HMGCRP04035 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCRP04035 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCRP04035 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.89■□□□□ 0.61
HMGCRP04035 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCRP04035 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCRP04035 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.89■□□□□ 0.61
HMGCRP04035 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.89■□□□□ 0.61
HMGCRP04035 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.89■□□□□ 0.61
HMGCRP04035 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HMGCRP04035 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.89■□□□□ 0.61
HMGCRP04035 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCRP04035 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCRP04035 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCRP04035 AC012317.2-201ENST00000623305 2251 ntBASIC18.89■□□□□ 0.61
HMGCRP04035 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
HMGCRP04035 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCRP04035 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCRP04035 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCRP04035 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCRP04035 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGCRP04035 AC005332.8-201ENST00000622750 2735 ntBASIC18.88■□□□□ 0.61
HMGCRP04035 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCRP04035 AC134043.2-201ENST00000624206 2238 ntBASIC18.88■□□□□ 0.61
HMGCRP04035 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCRP04035 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 AP006294.1-201ENST00000415407 339 ntBASIC18.88■□□□□ 0.61
HMGCRP04035 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.88■□□□□ 0.61
HMGCRP04035 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HMGCRP04035 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCRP04035 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCRP04035 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.88■□□□□ 0.61
HMGCRP04035 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCRP04035 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCRP04035 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HMGCRP04035 MPDU1-223ENST00000582151 728 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms