Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 RPSAP43-201ENST00000402237 625 ntBASIC17.29■□□□□ 0.36
MT-CO1P00395 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.29■□□□□ 0.36
MT-CO1P00395 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.29■□□□□ 0.36
MT-CO1P00395 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.29■□□□□ 0.36
MT-CO1P00395 DUX4L17-201ENST00000557360 1267 ntBASIC17.29■□□□□ 0.36
MT-CO1P00395 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.29■□□□□ 0.36
MT-CO1P00395 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.29■□□□□ 0.36
MT-CO1P00395 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.29■□□□□ 0.36
MT-CO1P00395 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.29■□□□□ 0.36
MT-CO1P00395 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.29■□□□□ 0.36
MT-CO1P00395 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
MT-CO1P00395 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.29■□□□□ 0.36
MT-CO1P00395 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MT-CO1P00395 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MT-CO1P00395 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MT-CO1P00395 UPF3AP3-201ENST00000420996 769 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 MCCD1P2-201ENST00000423228 335 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 GPX1P2-201ENST00000429271 606 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-CO1P00395 AL513480.1-201ENST00000451731 511 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.28■□□□□ 0.36
MT-CO1P00395 AC023141.13-201ENST00000604991 943 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 AC139530.3-201ENST00000620344 690 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 AC055717.3-201ENST00000622967 595 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MT-CO1P00395 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 AC124067.4-201ENST00000519691 2379 ntBASIC17.28■□□□□ 0.36
MT-CO1P00395 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MT-CO1P00395 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MT-CO1P00395 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-CO1P00395 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-CO1P00395 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-CO1P00395 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MT-CO1P00395 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.27■□□□□ 0.36
MT-CO1P00395 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-CO1P00395 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.27■□□□□ 0.36
MT-CO1P00395 PDPK2P-202ENST00000562415 1191 ntBASIC17.27■□□□□ 0.36
MT-CO1P00395 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
MT-CO1P00395 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MT-CO1P00395 MTDHP5-201ENST00000598980 586 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms