Protein–RNA interactions for Protein: O96020

CCNE2, G1/S-specific cyclin-E2, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2O96020 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNE2O96020 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCNE2O96020 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNE2O96020 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCNE2O96020 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNE2O96020 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCNE2O96020 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNE2O96020 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CCNE2O96020 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNE2O96020 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC080080.1-201ENST00000625121 2420 ntBASIC18.68■□□□□ 0.58
CCNE2O96020 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCNE2O96020 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCNE2O96020 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 AC084121.4-201ENST00000641598 221 ntBASIC18.68■□□□□ 0.58
CCNE2O96020 AF228730.8-201ENST00000642140 221 ntBASIC18.68■□□□□ 0.58
CCNE2O96020 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNE2O96020 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCNE2O96020 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.68■□□□□ 0.58
CCNE2O96020 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 AL512652.2-201ENST00000625156 1716 ntBASIC18.68■□□□□ 0.58
CCNE2O96020 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNE2O96020 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNE2O96020 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CCNE2O96020 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.67■□□□□ 0.58
CCNE2O96020 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCNE2O96020 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.67■□□□□ 0.58
CCNE2O96020 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCNE2O96020 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.67■□□□□ 0.58
CCNE2O96020 LINC00628-201ENST00000628516 1289 ntBASIC18.67■□□□□ 0.58
CCNE2O96020 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNE2O96020 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNE2O96020 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CCNE2O96020 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNE2O96020 AL603756.1-201ENST00000606511 2163 ntBASIC18.66■□□□□ 0.58
CCNE2O96020 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCNE2O96020 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCNE2O96020 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNE2O96020 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNE2O96020 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNE2O96020 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CCNE2O96020 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNE2O96020 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCNE2O96020 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCNE2O96020 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNE2O96020 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms