Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 UNC93B7-201ENST00000509439 705 ntBASIC16.98■□□□□ 0.31
VAPBO95292 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VAPBO95292 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
VAPBO95292 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPBO95292 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 LINC00895-201ENST00000629028 1637 ntBASIC16.97■□□□□ 0.31
VAPBO95292 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 PTCHD3P3-201ENST00000403073 906 ntBASIC16.97■□□□□ 0.31
VAPBO95292 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VAPBO95292 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPBO95292 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPBO95292 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VAPBO95292 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
VAPBO95292 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VAPBO95292 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 AL662844.4-201ENST00000606367 2838 ntBASIC16.97■□□□□ 0.31
VAPBO95292 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPBO95292 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VAPBO95292 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPBO95292 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
VAPBO95292 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.96■□□□□ 0.31
VAPBO95292 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.96■□□□□ 0.31
VAPBO95292 PAWRP1-201ENST00000451083 565 ntBASIC16.96■□□□□ 0.31
VAPBO95292 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 AC006504.4-201ENST00000592118 1568 ntBASIC16.96■□□□□ 0.31
VAPBO95292 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPBO95292 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPBO95292 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms