Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LTN1O94822 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
LTN1O94822 AC060834.1-201ENST00000443027 2032 ntBASIC22.02■■□□□ 1.12
LTN1O94822 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LTN1O94822 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.02■■□□□ 1.11
LTN1O94822 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
LTN1O94822 NME2P1-201ENST00000426182 414 ntBASIC22.02■■□□□ 1.11
LTN1O94822 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC22.02■■□□□ 1.11
LTN1O94822 RN7SL618P-201ENST00000477850 296 ntBASIC22.02■■□□□ 1.11
LTN1O94822 TP53TG3HP-202ENST00000569755 579 ntBASIC22.02■■□□□ 1.11
LTN1O94822 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.02■■□□□ 1.11
LTN1O94822 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.02■■□□□ 1.11
LTN1O94822 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LTN1O94822 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LTN1O94822 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.01■■□□□ 1.11
LTN1O94822 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC22.01■■□□□ 1.11
LTN1O94822 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC22.01■■□□□ 1.11
LTN1O94822 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.01■■□□□ 1.11
LTN1O94822 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.01■■□□□ 1.11
LTN1O94822 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
LTN1O94822 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
LTN1O94822 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC22.01■■□□□ 1.11
LTN1O94822 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC22.01■■□□□ 1.11
LTN1O94822 MAX-210ENST00000555419 765 ntTSL 5 BASIC22.01■■□□□ 1.11
LTN1O94822 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.01■■□□□ 1.11
LTN1O94822 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC22.01■■□□□ 1.11
LTN1O94822 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LTN1O94822 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22■■□□□ 1.11
LTN1O94822 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LTN1O94822 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22■■□□□ 1.11
LTN1O94822 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22■■□□□ 1.11
LTN1O94822 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
LTN1O94822 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22■■□□□ 1.11
LTN1O94822 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LTN1O94822 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22■■□□□ 1.11
LTN1O94822 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC22■■□□□ 1.11
LTN1O94822 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC22■■□□□ 1.11
LTN1O94822 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC22■■□□□ 1.11
LTN1O94822 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC22■■□□□ 1.11
LTN1O94822 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22■■□□□ 1.11
LTN1O94822 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22■■□□□ 1.11
LTN1O94822 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LTN1O94822 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22■■□□□ 1.11
LTN1O94822 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
LTN1O94822 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 AC098859.1-201ENST00000502915 1238 ntBASIC21.99■■□□□ 1.11
LTN1O94822 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.99■■□□□ 1.11
LTN1O94822 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.99■■□□□ 1.11
LTN1O94822 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LTN1O94822 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
LTN1O94822 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.99■■□□□ 1.11
LTN1O94822 GPAA1P2-202ENST00000606848 1787 ntBASIC21.99■■□□□ 1.11
LTN1O94822 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LTN1O94822 KRT17P7-201ENST00000451704 1104 ntBASIC21.99■■□□□ 1.11
LTN1O94822 RN7SL837P-201ENST00000463010 287 ntBASIC21.99■■□□□ 1.11
LTN1O94822 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.99■■□□□ 1.11
LTN1O94822 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.99■■□□□ 1.11
LTN1O94822 AC044860.1-202ENST00000559481 777 ntBASIC21.99■■□□□ 1.11
LTN1O94822 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LTN1O94822 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LTN1O94822 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.98■■□□□ 1.11
LTN1O94822 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.98■■□□□ 1.11
LTN1O94822 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
LTN1O94822 AP006294.1-201ENST00000415407 339 ntBASIC21.98■■□□□ 1.11
LTN1O94822 TMEM14DP-201ENST00000422205 345 ntBASIC21.98■■□□□ 1.11
LTN1O94822 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.98■■□□□ 1.11
LTN1O94822 ATP5G2P4-201ENST00000442175 420 ntBASIC21.98■■□□□ 1.11
LTN1O94822 ACA64.2-201ENST00000459014 129 ntBASIC21.98■■□□□ 1.11
LTN1O94822 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.98■■□□□ 1.11
LTN1O94822 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.98■■□□□ 1.11
LTN1O94822 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms