Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL5O76039 AL118508.1-201ENST00000613502 2345 ntBASIC19.62■□□□□ 0.73
CDKL5O76039 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL5O76039 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDKL5O76039 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.61■□□□□ 0.73
CDKL5O76039 AC092910.1-201ENST00000482027 1129 ntBASIC19.61■□□□□ 0.73
CDKL5O76039 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.61■□□□□ 0.73
CDKL5O76039 MIR7706-201ENST00000613747 67 ntBASIC19.61■□□□□ 0.73
CDKL5O76039 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.61■□□□□ 0.73
CDKL5O76039 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL5O76039 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL5O76039 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL5O76039 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CDKL5O76039 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CDKL5O76039 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC131009.4-201ENST00000624048 1740 ntBASIC19.6■□□□□ 0.73
CDKL5O76039 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.6■□□□□ 0.73
CDKL5O76039 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC108073.2-201ENST00000464002 357 ntBASIC19.6■□□□□ 0.73
CDKL5O76039 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CDKL5O76039 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 AP001005.1-201ENST00000571755 1248 ntBASIC19.6■□□□□ 0.73
CDKL5O76039 MIR4492-201ENST00000581627 80 ntBASIC19.6■□□□□ 0.73
CDKL5O76039 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
CDKL5O76039 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.6■□□□□ 0.73
CDKL5O76039 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.6■□□□□ 0.73
CDKL5O76039 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDKL5O76039 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CDKL5O76039 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKL5O76039 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.6■□□□□ 0.73
CDKL5O76039 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDKL5O76039 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKL5O76039 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKL5O76039 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKL5O76039 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.59■□□□□ 0.73
CDKL5O76039 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 AC010654.1-201ENST00000615722 808 ntBASIC19.59■□□□□ 0.73
CDKL5O76039 AP001350.2-201ENST00000625104 1094 ntBASIC19.59■□□□□ 0.73
CDKL5O76039 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDKL5O76039 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.59■□□□□ 0.73
CDKL5O76039 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDKL5O76039 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms