Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 AC010460.3-201ENST00000511359 1579 ntBASIC13.22□□□□□ -0.29
ZNF253O75346 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
ZNF253O75346 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.22□□□□□ -0.29
ZNF253O75346 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF253O75346 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.22□□□□□ -0.29
ZNF253O75346 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.22□□□□□ -0.29
ZNF253O75346 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ZNF253O75346 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ZNF253O75346 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ZNF253O75346 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF253O75346 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ZNF253O75346 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 AC113347.1-201ENST00000413321 391 ntBASIC13.21□□□□□ -0.29
ZNF253O75346 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 AC092597.1-201ENST00000487352 616 ntBASIC13.21□□□□□ -0.29
ZNF253O75346 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 AC010203.1-204ENST00000548782 407 ntBASIC13.21□□□□□ -0.29
ZNF253O75346 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.21□□□□□ -0.29
ZNF253O75346 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.21□□□□□ -0.29
ZNF253O75346 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.21□□□□□ -0.29
ZNF253O75346 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 AC005915.1-201ENST00000624912 2018 ntBASIC13.21□□□□□ -0.29
ZNF253O75346 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ZNF253O75346 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.21□□□□□ -0.29
ZNF253O75346 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.21□□□□□ -0.3
ZNF253O75346 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.21□□□□□ -0.3
ZNF253O75346 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
ZNF253O75346 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.21□□□□□ -0.3
ZNF253O75346 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
ZNF253O75346 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.2□□□□□ -0.3
ZNF253O75346 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.2□□□□□ -0.3
ZNF253O75346 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ZNF253O75346 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ZNF253O75346 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms